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Si001459m Si001459m Si021663m Si021663m Si023263m Si023263m Si023140m Si023140m Si022775m Si022775m Si000911m Si000911m Si018427m Si018427m Si034306m Si034306m Si002953m Si002953m Si002952m Si002952m Si002943m Si002943m
"Si018427m" - Vacuolar protein sorting-associated protein 29 in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018427mVacuolar protein sorting-associated protein 29 (189 aa)    
Predicted Functional Partners:
Si022775m
Uncharacterized protein (304 aa)
     
  0.992
Si034306m
Vacuolar protein sorting-associated protein 35 ; Plays a role in vesicular protein sorting (803 aa)
     
  0.991
Si000911m
Uncharacterized protein (549 aa)
     
  0.985
Si021663m
Uncharacterized protein (549 aa)
     
  0.985
Si001459m
Uncharacterized protein (444 aa)
       
 
  0.796
Si023263m
Uncharacterized protein (206 aa)
     
  0.745
Si023140m
Uncharacterized protein (231 aa)
     
  0.745
Si002953m
Uncharacterized protein (206 aa)
     
  0.745
Si002952m
Uncharacterized protein (206 aa)
     
  0.745
Si002943m
Uncharacterized protein (207 aa)
     
  0.745
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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