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Si010307m Si010307m Si018593m Si018593m Si031449m Si031449m Si007334m Si007334m rpoA rpoA Si032841m Si032841m Si003194m Si003194m Si018544m Si018544m Si018430m Si018430m Si011236m Si011236m Si026478m Si026478m
"Si018544m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018544mUncharacterized protein (161 aa)    
Predicted Functional Partners:
Si032841m
Uncharacterized protein (136 aa)
     
    0.999
Si031449m
Uncharacterized protein (141 aa)
     
    0.999
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si003194m
Uncharacterized protein (157 aa)
   
  0.998
Si018593m
Uncharacterized protein (151 aa)
   
  0.998
Si011236m
Uncharacterized protein (152 aa)
   
  0.998
Si026478m
Uncharacterized protein (389 aa)
   
  0.998
Si010307m
Uncharacterized protein (389 aa)
   
  0.998
Si018430m
Uncharacterized protein (189 aa)
   
  0.998
Si007334m
Uncharacterized protein (190 aa)
   
  0.998
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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