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Si005731m Si005731m Si021349m Si021349m Si016661m Si016661m Si016191m Si016191m Si018798m Si018798m Si028720m Si028720m Si000067m Si000067m Si004715m Si004715m Si016249m Si016249m Si013306m Si013306m Si016352m Si016352m
"Si018798m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018798mUncharacterized protein (103 aa)    
Predicted Functional Partners:
Si028720m
Uncharacterized protein (1256 aa)
       
 
  0.848
Si000067m
Uncharacterized protein (1292 aa)
       
 
  0.848
Si021349m
Uncharacterized protein (711 aa)
       
 
  0.765
Si016191m
Transcription elongation factor SPT5 (1022 aa)
       
 
  0.667
Si005731m
Transcription elongation factor SPT5 (1124 aa)
       
 
  0.667
Si016352m
Uncharacterized protein (796 aa)
       
      0.622
Si004715m
Uncharacterized protein (165 aa)
       
      0.622
Si016661m
Uncharacterized protein (620 aa)
       
      0.562
Si016249m
Uncharacterized protein (928 aa)
       
      0.554
Si013306m
Uncharacterized protein (752 aa)
       
      0.553
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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