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Si021817m Si021817m Si022361m Si022361m Si001296m Si001296m Si029595m Si029595m Si017307m Si017307m Si020943m Si020943m Si000990m Si000990m Si013653m Si013653m Si000006m Si000006m Si019168m Si019168m Si029433m Si029433m
"Si019168m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019168mUncharacterized protein (566 aa)    
Predicted Functional Partners:
Si000990m
Uncharacterized protein (528 aa)
 
   
  0.653
Si017307m
Uncharacterized protein (423 aa)
 
     
  0.640
Si021817m
Uncharacterized protein (506 aa)
 
   
  0.550
Si029433m
Uncharacterized protein (540 aa)
           
  0.467
Si020943m
Uncharacterized protein (2158 aa)
   
   
  0.449
Si000006m
Uncharacterized protein (2163 aa)
   
   
  0.449
Si029595m
Uridine kinase (499 aa)
   
   
  0.419
Si013653m
Uridine kinase (484 aa)
   
   
  0.419
Si022361m
Uncharacterized protein (379 aa)
 
     
  0.418
Si001296m
Uncharacterized protein (472 aa)
       
 
  0.416
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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