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STRINGSTRING
Si015244m Si015244m Si034468m Si034468m Si015765m Si015765m Si021021m Si021021m Si009584m Si009584m Si019518m Si019518m Si016710m Si016710m Si015238m Si015238m Si000066m Si000066m
"Si019518m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019518mUncharacterized protein (533 aa)    
Predicted Functional Partners:
Si016710m
Uncharacterized protein (595 aa)
       
 
  0.573
Si015238m
Uncharacterized protein (243 aa)
       
 
  0.559
Si015765m
Uncharacterized protein (524 aa)
     
   
  0.502
Si034468m
Uncharacterized protein (710 aa)
     
 
  0.482
Si021021m
Serine/threonine-protein phosphatase (1161 aa)
           
  0.456
Si009584m
Uncharacterized protein (641 aa)
     
   
  0.434
Si015244m
Non-specific serine/threonine protein kinase (1283 aa)
           
  0.424
Si000066m
Uncharacterized protein (1294 aa)
           
  0.424
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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