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Si000808m Si000808m Si039110m Si039110m Si034747m Si034747m Si035039m Si035039m Si029215m Si029215m Si019533m Si019533m Si034889m Si034889m Si034922m Si034922m Si000774m Si000774m Si012203m Si012203m Si021600m Si021600m
"Si019533m" - L-lactate dehydrogenase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019533mL-lactate dehydrogenase (352 aa)    
Predicted Functional Partners:
Si034747m
Malic enzyme (613 aa)
   
  0.969
Si029215m
Malic enzyme (623 aa)
   
  0.969
Si021600m
Malic enzyme (576 aa)
   
  0.969
Si012203m
Malic enzyme (185 aa)
   
  0.969
Si000808m
Malic enzyme (580 aa)
   
  0.969
Si000774m
Malic enzyme (593 aa)
   
  0.969
Si039110m
Pyruvate kinase (510 aa)
   
  0.968
Si035039m
Pyruvate kinase (545 aa)
   
  0.968
Si034922m
Pyruvate kinase (568 aa)
   
  0.968
Si034889m
Pyruvate kinase (575 aa)
   
  0.968
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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