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Si040191m Si040191m Si034151m Si034151m Si021460m Si021460m Si001536m Si001536m Si032759m Si032759m Si019550m Si019550m Si029820m Si029820m Si000300m Si000300m Si000124m Si000124m Si007397m Si007397m Si014604m Si014604m
"Si019550m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019550mUncharacterized protein (887 aa)    
Predicted Functional Partners:
Si000300m
Uncharacterized protein (843 aa)
     
  0.968
Si029820m
Uncharacterized protein (450 aa)
     
  0.958
Si021460m
Uncharacterized protein (632 aa)
     
  0.958
Si001536m
Uncharacterized protein (429 aa)
     
  0.958
Si034151m
Beta-adaptin-like protein ; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (898 aa)
     
0.952
Si007397m
Uncharacterized protein (161 aa)
     
  0.951
Si040191m
Uncharacterized protein (161 aa)
     
  0.949
Si014604m
Uncharacterized protein (143 aa)
     
  0.949
Si000124m
Uncharacterized protein (1099 aa)
     
  0.927
Si032759m
Uncharacterized protein (347 aa)
     
  0.894
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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