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Si006583m Si006583m Si038742m Si038742m Si034855m Si034855m Si020943m Si020943m Si000006m Si000006m Si039028m Si039028m Si021917m Si021917m Si019684m Si019684m Si034590m Si034590m Si001253m Si001253m Si017403m Si017403m
"Si019684m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019684mUncharacterized protein (134 aa)    
Predicted Functional Partners:
Si034855m
Uncharacterized protein (581 aa)
   
 
  0.786
Si039028m
Uncharacterized protein (509 aa)
       
  0.596
Si034590m
Uncharacterized protein (655 aa)
       
  0.596
Si020943m
Uncharacterized protein (2158 aa)
   
   
  0.579
Si000006m
Uncharacterized protein (2163 aa)
   
   
  0.579
Si038742m
Phosphoglycerate kinase (651 aa)
   
   
  0.576
Si021917m
Phosphoglycerate kinase (480 aa)
   
   
  0.527
Si017403m
Phosphoglycerate kinase (402 aa)
   
   
  0.527
Si006583m
Phosphoglycerate kinase (401 aa)
   
   
  0.527
Si001253m
Phosphoglycerate kinase (482 aa)
   
   
  0.527
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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