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Si020775m Si020775m Si038756m Si038756m Si029424m Si029424m Si038003m Si038003m Si038148m Si038148m Si039039m Si039039m Si018585m Si018585m Si026951m Si026951m Si019750m Si019750m ccsA ccsA Si020783m Si020783m
"Si019750m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019750mUncharacterized protein (349 aa)    
Predicted Functional Partners:
Si026951m
Uncharacterized protein (152 aa)
   
 
  0.918
Si018585m
Uncharacterized protein (152 aa)
   
 
  0.918
Si039039m
Uncharacterized protein (294 aa)
   
 
  0.897
Si029424m
Thioredoxin reductase (544 aa)
   
   
  0.620
ccsA
Cytochrome c heme attachment protein (186 aa)
   
   
  0.550
Si020775m
Uncharacterized protein (240 aa)
   
   
  0.550
Si020783m
Uncharacterized protein (461 aa)
     
 
  0.531
Si038756m
Uncharacterized protein (143 aa)
   
   
  0.530
Si038148m
Uncharacterized protein (107 aa)
   
   
  0.530
Si038003m
Uncharacterized protein (132 aa)
   
   
  0.530
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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