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Si019789m Si019789m Si025887m Si025887m Si018063m Si018063m Si010810m Si010810m Si025993m Si025993m Si021117m Si021117m Si021342m Si021342m Si000286m Si000286m Si007939m Si007939m Si017989m Si017989m Si016456m Si016456m
"Si019789m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019789mUncharacterized protein (406 aa)    
Predicted Functional Partners:
Si016456m
DNA helicase (729 aa)
     
  0.989
Si025887m
Uncharacterized protein (1012 aa)
     
  0.978
Si021342m
DNA helicase (720 aa)
     
  0.968
Si021117m
Uncharacterized protein ; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
     
  0.965
Si025993m
DNA helicase (803 aa)
     
  0.961
Si007939m
DNA helicase (665 aa)
     
  0.961
Si000286m
DNA helicase (850 aa)
     
  0.961
Si018063m
Uncharacterized protein (274 aa)
     
  0.960
Si017989m
Uncharacterized protein (288 aa)
     
  0.960
Si010810m
Uncharacterized protein (275 aa)
     
  0.960
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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