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Si029736m Si029736m Si035565m Si035565m Si019865m Si019865m Si033005m Si033005m Si030981m Si030981m Si030132m Si030132m Si013485m Si013485m Si029207m Si029207m Si022815m Si022815m Si023132m Si023132m Si015389m Si015389m
"Si019865m" - 3-hydroxy-3-methylglutaryl coenzyme A reductase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si019865m3-hydroxy-3-methylglutaryl coenzyme A reductase (540 aa)    
Predicted Functional Partners:
Si035565m
Uncharacterized protein (464 aa)
   
 
  0.981
Si029736m
Uncharacterized protein (470 aa)
   
 
  0.981
Si030132m
Uncharacterized protein (387 aa)
       
  0.972
Si023132m
Uncharacterized protein (233 aa)
       
  0.972
Si015389m
Uncharacterized protein (430 aa)
   
 
  0.818
Si029207m
3-hydroxy-3-methylglutaryl coenzyme A reductase (625 aa)
   
   
 
0.802
Si013485m
3-hydroxy-3-methylglutaryl coenzyme A reductase (574 aa)
   
   
 
0.802
Si033005m
Uncharacterized protein (233 aa)
   
   
  0.632
Si030981m
Uncharacterized protein (237 aa)
   
   
  0.632
Si022815m
Uncharacterized protein (297 aa)
   
   
  0.632
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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