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Si006278m Si006278m Si001809m Si001809m Si019728m Si019728m Si020158m Si020158m Si036413m Si036413m
"Si020158m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si020158mUncharacterized protein (504 aa)    
Predicted Functional Partners:
Si019728m
Uncharacterized protein (580 aa)
           
  0.572
Si001809m
Uncharacterized protein (387 aa)
           
  0.468
Si036413m
Hexosyltransferase (349 aa)
           
  0.463
Si006278m
Uncharacterized protein (508 aa)
           
  0.463
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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