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Si006304m Si006304m Si001468m Si001468m Si021535m Si021535m Si020162m Si020162m Si002299m Si002299m Si001621m Si001621m Si038849m Si038849m Si024736m Si024736m Si009636m Si009636m Si017226m Si017226m Si009455m Si009455m
"Si020162m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si020162mUncharacterized protein (313 aa)    
Predicted Functional Partners:
Si001621m
Uncharacterized protein (416 aa)
     
  0.818
Si021535m
Uncharacterized protein (599 aa)
     
  0.604
Si017226m
Uncharacterized protein (439 aa)
     
  0.604
Si009636m
Uncharacterized protein (606 aa)
     
  0.604
Si009455m
Uncharacterized protein (745 aa)
     
  0.604
Si006304m
Uncharacterized protein (492 aa)
     
  0.604
Si002299m
Uncharacterized protein (316 aa)
     
  0.604
Si038849m
Uncharacterized protein (326 aa)
     
  0.583
Si001468m
Uncharacterized protein (442 aa)
     
      0.570
Si024736m
Uncharacterized protein (562 aa)
     
  0.546
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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