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rpoA rpoA Si039107m Si039107m Si038035m Si038035m Si013827m Si013827m Si031449m Si031449m Si032841m Si032841m Si007510m Si007510m Si037685m Si037685m Si022971m Si022971m Si022999m Si022999m Si020790m Si020790m
"Si020790m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si020790mUncharacterized protein (493 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si032841m
Uncharacterized protein (136 aa)
     
  0.999
Si031449m
Uncharacterized protein (141 aa)
     
  0.999
Si013827m
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (415 aa)
   
  0.998
Si022999m
40S ribosomal protein S4 (262 aa)
   
  0.997
Si022971m
40S ribosomal protein S4 (265 aa)
   
  0.997
Si038035m
Uncharacterized protein (126 aa)
   
  0.997
Si037685m
Uncharacterized protein (183 aa)
   
  0.997
Si007510m
Uncharacterized protein (129 aa)
   
  0.997
Si039107m
Uncharacterized protein (272 aa)
   
  0.997
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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