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Si039577m Si039577m Si020854m Si020854m Si024102m Si024102m psbC psbC psbI psbI psbN psbN Si020864m Si020864m psbA psbA Si020865m Si020865m Si020855m Si020855m Si023619m Si023619m
"Si020855m" - Annotation not available in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si020855mAnnotation not available (61 aa)    
Predicted Functional Partners:
psbI
Photosystem II protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (36 aa)
     
  0.849
Si020864m
Annotation not available (83 aa)
     
  0.834
Si024102m
Uncharacterized protein (51 aa)
     
 
  0.786
Si020865m
Annotation not available (38 aa)
   
 
  0.781
psbC
Photosystem II CP43 chlorophyll apoprotein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (439 aa)
   
 
  0.693
psbA
Photosystem II protein D1 (353 aa)
   
 
  0.690
psbN
Photosystem II protein N; May play a role in photosystem I and II biogenesis (43 aa)
   
 
  0.655
Si020854m
Uncharacterized protein (461 aa)
     
   
  0.642
Si039577m
Photosystem II reaction center protein Z ; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna (60 aa)
     
 
  0.628
Si023619m
Uncharacterized protein (133 aa)
     
  0.611
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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