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Si039253m Si039253m Si020767m Si020767m ndhE ndhE Si020851m Si020851m Si020872m Si020872m ndhA ndhA Si020754m Si020754m Si020839m Si020839m Si020751m Si020751m ndhB ndhB Si020779m Si020779m
"ndhA" - NADH-plastoquinone oxidoreductase subunit 1 in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhANADH-plastoquinone oxidoreductase subunit 1 (184 aa)    
Predicted Functional Partners:
ndhB
NADH-plastoquinone oxidoreductase subunit 2 (262 aa)
 
  0.999
Si020779m
Uncharacterized protein (254 aa)
 
  0.999
Si020851m
Uncharacterized protein (389 aa)
 
  0.999
Si020767m
Uncharacterized protein (339 aa)
 
  0.999
Si020751m
Uncharacterized protein (210 aa)
 
  0.999
Si039253m
Uncharacterized protein (150 aa)
   
  0.998
Si020872m
Uncharacterized protein (580 aa)
 
  0.995
Si020754m
Uncharacterized protein (561 aa)
 
  0.995
ndhE
NADH-plastoquinone oxidoreductase subunit 4L (96 aa)
 
  0.993
Si020839m
Uncharacterized protein (333 aa)
 
  0.992
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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