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Si020855m Si020855m Si020865m Si020865m psaA psaA psbA psbA psbC psbC Si026480m Si026480m Si007947m Si007947m psbN psbN Si003343m Si003343m psbK psbK Si017614m Si017614m
"psbN" - Photosystem II protein N in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psbNPhotosystem II protein N; May play a role in photosystem I and II biogenesis (43 aa)    
Predicted Functional Partners:
psbA
Photosystem II protein D1 (353 aa)
   
 
  0.780
Si007947m
Uncharacterized protein (109 aa)
   
 
  0.738
Si020865m
Annotation not available (38 aa)
   
 
  0.713
psbC
Photosystem II CP43 chlorophyll apoprotein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (439 aa)
   
 
  0.700
psbK
Photosystem II protein K (109 aa)
   
 
  0.679
Si003343m
Uncharacterized protein (125 aa)
   
     
  0.655
Si020855m
Annotation not available (61 aa)
   
 
  0.655
psaA
Photosystem I P700 apoprotein A1 (703 aa)
     
   
  0.652
Si026480m
Fructose-bisphosphate aldolase (389 aa)
           
  0.646
Si017614m
Fructose-bisphosphate aldolase (358 aa)
           
  0.646
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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