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ycf4 ycf4 psaI psaI Si019827m Si019827m Si020878m Si020878m Si020848m Si020848m Si024102m Si024102m Si015158m Si015158m Si019152m Si019152m psaA psaA cemA cemA Si020826m Si020826m
"psaI" - Photosystem I subunit VIII in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psaIPhotosystem I subunit VIII; May help in the organization of the PsaL subunit (36 aa)    
Predicted Functional Partners:
Si020848m
Uncharacterized protein (596 aa)
     
 
  0.684
Si015158m
Uncharacterized protein (48 aa)
     
 
  0.680
Si024102m
Uncharacterized protein (51 aa)
     
   
  0.662
Si019827m
Uncharacterized protein (74 aa)
     
 
  0.658
ycf4
Photosystem I assembly protein ycf4; Seems to be required for the assembly of the photosystem I complex (185 aa)
     
 
  0.623
Si020826m
Annotation not available (185 aa)
     
 
  0.623
Si020878m
Uncharacterized protein (84 aa)
     
   
  0.623
psaA
Photosystem I P700 apoprotein A1 (703 aa)
     
 
  0.601
Si019152m
Uncharacterized protein (108 aa)
     
   
  0.601
cemA
Chloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake (230 aa)
     
   
  0.597
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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