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Si038471m Si038471m Si020881m Si020881m Si032303m Si032303m rpoA rpoA Si030996m Si030996m Si039107m Si039107m Si014067m Si014067m Si037006m Si037006m Si030743m Si030743m Si027047m Si027047m Si023978m Si023978m
"Si020881m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si020881mUncharacterized protein (162 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si030996m
Uncharacterized protein (232 aa)
   
  0.998
Si014067m
Uncharacterized protein (330 aa)
   
  0.998
Si039107m
Uncharacterized protein (272 aa)
   
  0.998
Si037006m
Uncharacterized protein (273 aa)
   
  0.998
Si030743m
Uncharacterized protein (279 aa)
   
  0.998
Si038471m
Annotation not available (56 aa)
   
  0.998
Si027047m
Uncharacterized protein (110 aa)
   
  0.998
Si023978m
Annotation not available (56 aa)
   
  0.998
Si032303m
Uncharacterized protein (94 aa)
   
  0.998
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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