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Si037386m Si037386m Si022078m Si022078m Si020952m Si020952m Si022757m Si022757m Si034265m Si034265m Si024055m Si024055m Si020954m Si020954m Si016079m Si016079m Si009164m Si009164m Si020966m Si020966m Si001171m Si001171m
"Si020954m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si020954mUncharacterized protein (1734 aa)    
Predicted Functional Partners:
Si020952m
Uncharacterized protein (1751 aa)
     
 
  0.932
Si022078m
Uncharacterized protein (439 aa)
     
  0.890
Si001171m
Uncharacterized protein (495 aa)
     
 
  0.887
Si022757m
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (307 aa)
       
 
  0.816
Si034265m
Uncharacterized protein (831 aa)
     
  0.812
Si037386m
Uncharacterized protein (225 aa)
       
      0.651
Si024055m
Uncharacterized protein (1345 aa)
     
    0.628
Si020966m
Uncharacterized protein (1533 aa)
     
    0.628
Si016079m
Uncharacterized protein (1687 aa)
     
    0.628
Si009164m
Uncharacterized protein (1806 aa)
     
    0.628
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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