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Si004835m Si004835m Si016908m Si016908m Si021365m Si021365m Si020979m Si020979m Si033886m Si033886m Si017803m Si017803m Si000062m Si000062m Si010167m Si010167m Si003826m Si003826m Si006243m Si006243m Si013709m Si013709m
"Si020979m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si020979mUncharacterized protein (1357 aa)    
Predicted Functional Partners:
Si033886m
Uncharacterized protein (1507 aa)
     
  0.963
Si000062m
Uncharacterized protein (1339 aa)
     
  0.963
Si017803m
Uncharacterized protein (322 aa)
       
  0.955
Si016908m
Uncharacterized protein (522 aa)
     
  0.951
Si013709m
Histone deacetylase (458 aa)
     
  0.951
Si010167m
Histone deacetylase (430 aa)
     
  0.951
Si006243m
Histone deacetylase (518 aa)
     
  0.951
Si004835m
Uncharacterized protein (466 aa)
     
  0.951
Si003826m
Histone deacetylase (410 aa)
     
  0.951
Si021365m
Uncharacterized protein (698 aa)
     
  0.943
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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