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Si033402m Si033402m Si025848m Si025848m MLH1 MLH1 Si018115m Si018115m Si025887m Si025887m Si021117m Si021117m Si000350m Si000350m Si000033m Si000033m Si021048m Si021048m Si024115m Si024115m Si019314m Si019314m
"Si021048m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021048mUncharacterized protein ; Component of the post-replicative DNA mismatch repair system (MMR) (1084 aa)    
Predicted Functional Partners:
Si019314m
Uncharacterized protein (834 aa)
 
  0.979
MLH1
DNA mismatch repair protein MLH1 (724 aa)
 
  0.977
Si033402m
Uncharacterized protein (1102 aa)
   
  0.944
Si018115m
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.910
Si000033m
DNA polymerase (1536 aa)
     
  0.822
Si025848m
DNA polymerase (1105 aa)
     
  0.811
Si024115m
Uncharacterized protein (541 aa)
   
  0.808
Si000350m
Uncharacterized protein (801 aa)
   
  0.808
Si021117m
Uncharacterized protein ; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
   
0.798
Si025887m
Uncharacterized protein (1012 aa)
   
 
  0.786
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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