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Si021022m Si021022m Si032249m Si032249m Si029437m Si029437m Si029445m Si029445m Si016870m Si016870m Si021228m Si021228m Si026186m Si026186m Si029424m Si029424m Si021674m Si021674m Si017691m Si017691m Si006276m Si006276m
"Si021228m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021228mUncharacterized protein (822 aa)    
Predicted Functional Partners:
Si017691m
Uncharacterized protein (345 aa)
         
  0.837
Si029424m
Thioredoxin reductase (544 aa)
   
 
  0.760
Si032249m
Uncharacterized protein (457 aa)
     
 
  0.758
Si029445m
Sodium/hydrogen exchanger (536 aa)
     
 
  0.758
Si029437m
Sodium/hydrogen exchanger (539 aa)
     
 
  0.758
Si026186m
Sodium/hydrogen exchanger (547 aa)
     
 
  0.758
Si021674m
Sodium/hydrogen exchanger (546 aa)
     
 
  0.758
Si021022m
Uncharacterized protein (1160 aa)
     
 
  0.758
Si006276m
Sodium/hydrogen exchanger (509 aa)
     
 
  0.758
Si016870m
Uncharacterized protein (532 aa)
     
 
  0.757
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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