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Si040228m Si040228m Si039256m Si039256m Si038744m Si038744m Si035649m Si035649m Si035415m Si035415m Si021244m Si021244m Si000118m Si000118m Si016336m Si016336m Si035366m Si035366m Si034790m Si034790m Si034298m Si034298m
"Si021244m" - Beta-galactosidase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021244mBeta-galactosidase (809 aa)    
Predicted Functional Partners:
Si034790m
Uncharacterized protein (600 aa)
       
      0.846
Si034298m
Uncharacterized protein (807 aa)
       
      0.553
Si016336m
Uncharacterized protein (805 aa)
       
      0.553
Si000118m
Uncharacterized protein (1116 aa)
         
  0.447
Si040228m
Uncharacterized protein (170 aa)
       
  0.418
Si039256m
Carboxypeptidase (441 aa)
       
  0.418
Si038744m
Carboxypeptidase (459 aa)
       
  0.418
Si035649m
Uncharacterized protein (452 aa)
       
  0.418
Si035415m
Uncharacterized protein (486 aa)
       
  0.418
Si035366m
Carboxypeptidase (494 aa)
       
  0.418
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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