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Si013929m Si013929m Si034160m Si034160m Si005930m Si005930m Si035798m Si035798m Si016427m Si016427m Si021330m Si021330m Si010800m Si010800m Si026735m Si026735m Si020222m Si020222m Si008697m Si008697m Si016235m Si016235m
"Si021330m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021330mUncharacterized protein (728 aa)    
Predicted Functional Partners:
Si016427m
Uncharacterized protein (749 aa)
       
0.678
Si013929m
Uncharacterized protein (379 aa)
       
  0.625
Si034160m
Uncharacterized protein (894 aa)
       
  0.544
Si005930m
Uncharacterized protein (740 aa)
       
  0.544
Si035798m
Uncharacterized protein (431 aa)
       
  0.522
Si020222m
Uncharacterized protein (1600 aa)
     
   
  0.460
Si008697m
Uncharacterized protein (1908 aa)
     
   
  0.460
Si016235m
Uncharacterized protein (948 aa)
           
  0.432
Si026735m
Uncharacterized protein (279 aa)
           
  0.428
Si010800m
Uncharacterized protein (278 aa)
           
  0.428
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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