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Si034939m Si034939m Si029364m Si029364m Si000410m Si000410m Si028859m Si028859m Si000893m Si000893m Si013223m Si013223m Si018759m Si018759m Si013650m Si013650m Si021387m Si021387m Si017049m Si017049m Si021316m Si021316m
"Si021387m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021387mUncharacterized protein (681 aa)    
Predicted Functional Partners:
Si034939m
Uncharacterized protein (565 aa)
       
      0.666
Si029364m
Uncharacterized protein (568 aa)
       
      0.666
Si000893m
Aspartokinase (554 aa)
       
      0.666
Si021316m
Uncharacterized protein (743 aa)
       
      0.556
Si000410m
Uncharacterized protein (760 aa)
       
      0.556
Si028859m
Uncharacterized protein (918 aa)
       
      0.555
Si013223m
Uncharacterized protein (918 aa)
       
      0.555
Si017049m
Adenosylhomocysteinase (485 aa)
       
 
  0.543
Si013650m
Adenosylhomocysteinase (485 aa)
       
 
  0.543
Si018759m
Peptidyl-prolyl cis-trans isomerase (112 aa)
       
      0.531
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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