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STRINGSTRING
Si016142m Si016142m Si019764m Si019764m Si001466m Si001466m Si030978m Si030978m Si021405m Si021405m Si037961m Si037961m Si016085m Si016085m Si017000m Si017000m
"Si021405m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021405mUncharacterized protein (664 aa)    
Predicted Functional Partners:
Si016085m
Uncharacterized protein (1523 aa)
       
 
  0.782
Si037961m
Uncharacterized protein (139 aa)
       
 
  0.602
Si030978m
Uncharacterized protein (238 aa)
       
 
  0.602
Si019764m
Uncharacterized protein (315 aa)
           
  0.416
Si001466m
Uncharacterized protein (443 aa)
           
  0.416
Si016142m
Uncharacterized protein (1151 aa)
           
  0.408
Si017000m
Uncharacterized protein (498 aa)
           
  0.407
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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