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Si029136m Si029136m Si013817m Si013817m Si021059m Si021059m Si033595m Si033595m Si021418m Si021418m Si016066m Si016066m Si009169m Si009169m Si025850m Si025850m
"Si021418m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021418mUncharacterized protein (658 aa)    
Predicted Functional Partners:
Si016066m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2050 aa)
     
 
  0.673
Si009169m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1546 aa)
     
 
  0.673
Si033595m
Uncharacterized protein (157 aa)
           
  0.456
Si029136m
Uncharacterized protein (676 aa)
           
  0.456
Si013817m
Uncharacterized protein (421 aa)
           
  0.456
Si021059m
Uncharacterized protein (1049 aa)
     
   
  0.417
Si025850m
Uncharacterized protein (1095 aa)
           
  0.408
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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