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Si018524m Si018524m Si032049m Si032049m Si021436m Si021436m Si013709m Si013709m Si033886m Si033886m Si036727m Si036727m Si013224m Si013224m Si016908m Si016908m Si000062m Si000062m Si016274m Si016274m Si019646m Si019646m
"Si021436m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021436mUncharacterized protein (647 aa)    
Predicted Functional Partners:
Si036727m
Uncharacterized protein (313 aa)
       
 
0.542
Si033886m
Uncharacterized protein (1507 aa)
     
  0.534
Si000062m
Uncharacterized protein (1339 aa)
     
  0.534
Si019646m
Uncharacterized protein (922 aa)
           
  0.468
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
           
  0.468
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
           
  0.468
Si018524m
Uncharacterized protein (167 aa)
       
 
  0.449
Si032049m
Uncharacterized protein (448 aa)
           
  0.420
Si016908m
Uncharacterized protein (522 aa)
       
  0.418
Si013709m
Histone deacetylase (458 aa)
       
  0.418
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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