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Si034389m Si034389m Si000137m Si000137m Si028874m Si028874m Si034925m Si034925m Si013288m Si013288m Si034519m Si034519m Si021364m Si021364m Si005866m Si005866m Si016399m Si016399m Si021515m Si021515m Si031115m Si031115m
"Si021515m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021515mUncharacterized protein (608 aa)    
Predicted Functional Partners:
Si034519m
Uncharacterized protein (686 aa)
     
  0.993
Si013288m
Uncharacterized protein (780 aa)
     
  0.993
Si016399m
Uncharacterized protein (763 aa)
     
  0.992
Si000137m
Uncharacterized protein (1073 aa)
     
  0.953
Si034389m
Uncharacterized protein (751 aa)
     
  0.934
Si021364m
Uncharacterized protein (699 aa)
     
  0.920
Si005866m
Uncharacterized protein (820 aa)
     
  0.909
Si028874m
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (888 aa)
     
  0.771
Si034925m
Uncharacterized protein (567 aa)
     
  0.742
Si031115m
Uncharacterized protein (208 aa)
     
  0.728
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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