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Si014079m Si014079m Si034375m Si034375m Si016674m Si016674m Si036375m Si036375m Si016091m Si016091m Si021558m Si021558m Si009759m Si009759m Si029538m Si029538m Si001153m Si001153m Si009447m Si009447m Si004479m Si004479m
"Si021558m" - Purple acid phosphatase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021558mPurple acid phosphatase (592 aa)    
Predicted Functional Partners:
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
         
  0.601
Si009759m
Uncharacterized protein (546 aa)
       
    0.535
Si036375m
Uncharacterized protein (354 aa)
   
 
    0.474
Si034375m
Uncharacterized protein (755 aa)
   
 
    0.474
Si029538m
Uncharacterized protein (511 aa)
   
 
    0.474
Si016674m
Uncharacterized protein (614 aa)
   
 
    0.474
Si014079m
Uncharacterized protein (326 aa)
   
 
    0.474
Si009447m
Uncharacterized protein (751 aa)
   
 
    0.474
Si004479m
Uncharacterized protein (153 aa)
   
 
    0.474
Si001153m
Uncharacterized protein (499 aa)
   
 
    0.474
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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