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Si040090m Si040090m Si019859m Si019859m Si037393m Si037393m Si026979m Si026979m Si021228m Si021228m Si021020m Si021020m Si021674m Si021674m Si023239m Si023239m Si023163m Si023163m Si018774m Si018774m waxy waxy
"Si021674m" - Sodium/hydrogen exchanger in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021674mSodium/hydrogen exchanger (546 aa)    
Predicted Functional Partners:
Si021228m
Uncharacterized protein (822 aa)
     
 
  0.758
Si021020m
Uncharacterized protein (1164 aa)
     
 
  0.758
waxy
Granule bound starch synthase (606 aa)
         
  0.685
Si040090m
Uncharacterized protein (427 aa)
     
  0.649
Si037393m
Uncharacterized protein (225 aa)
     
  0.649
Si026979m
Uncharacterized protein (141 aa)
     
  0.649
Si023239m
Uncharacterized protein (211 aa)
     
  0.649
Si023163m
Uncharacterized protein (225 aa)
     
  0.649
Si019859m
Uncharacterized protein (77 aa)
     
  0.649
Si018774m
Uncharacterized protein (109 aa)
     
  0.649
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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