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Si036533m Si036533m Si031523m Si031523m Si017327m Si017327m Si014658m Si014658m Si030380m Si030380m Si021697m Si021697m Si016757m Si016757m Si001973m Si001973m
"Si021697m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si021697mUncharacterized protein (540 aa)    
Predicted Functional Partners:
Si016757m
Uncharacterized protein (577 aa)
           
  0.457
Si017327m
Uncharacterized protein (419 aa)
           
  0.426
Si036533m
Xyloglucan endotransglucosylase/hydrolase ; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (333 aa)
           
  0.424
Si031523m
Uncharacterized protein (123 aa)
           
  0.424
Si030380m
Xyloglucan endotransglucosylase/hydrolase ; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (345 aa)
           
  0.424
Si014658m
Uncharacterized protein (124 aa)
           
  0.424
Si001973m
Uncharacterized protein (361 aa)
       
 
  0.404
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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