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Si006550m Si006550m Si037363m Si037363m Si017294m Si017294m Si001731m Si001731m Si022010m Si022010m Si022558m Si022558m Si021165m Si021165m Si016496m Si016496m Si026068m Si026068m Si006954m Si006954m Si008330m Si008330m
"Si022010m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022010mUncharacterized protein (454 aa)    
Predicted Functional Partners:
Si017294m
Uncharacterized protein (425 aa)
       
      0.790
Si026068m
Uncharacterized protein (675 aa)
       
      0.789
Si006954m
Uncharacterized protein (308 aa)
     
 
  0.699
Si021165m
Uncharacterized protein (890 aa)
       
      0.656
Si008330m
Uncharacterized protein (162 aa)
     
 
  0.586
Si037363m
Uncharacterized protein (227 aa)
       
      0.545
Si016496m
Uncharacterized protein (704 aa)
       
 
  0.529
Si001731m
Uncharacterized protein (399 aa)
       
      0.529
Si022558m
Ribosomal protein (344 aa)
       
      0.444
Si006550m
Uncharacterized protein (413 aa)
       
      0.444
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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