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Si034082m Si034082m Si028803m Si028803m Si009245m Si009245m Si000006m Si000006m Si013192m Si013192m Si017536m Si017536m Si035903m Si035903m Si022178m Si022178m Si001950m Si001950m Si010235m Si010235m Si010358m Si010358m
"Si022178m" - Isocitrate dehydrogenase [NADP] in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022178mIsocitrate dehydrogenase [NADP] (415 aa)    
Predicted Functional Partners:
Si001950m
Isocitrate dehydrogenase [NAD] subunit, mitochondrial (365 aa)
   
  0.986
Si017536m
Uncharacterized protein (375 aa)
   
  0.978
Si010358m
Uncharacterized protein (377 aa)
   
  0.978
Si034082m
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (986 aa)
   
  0.977
Si013192m
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (983 aa)
   
  0.977
Si000006m
Uncharacterized protein (2163 aa)
   
 
  0.975
Si028803m
Uncharacterized protein (1017 aa)
     
 
  0.960
Si009245m
Uncharacterized protein (1023 aa)
     
 
  0.960
Si035903m
Glutamate dehydrogenase (411 aa)
     
  0.920
Si010235m
Glutamate dehydrogenase (411 aa)
     
  0.920
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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