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Si010307m Si010307m Si031425m Si031425m Si026478m Si026478m Si037330m Si037330m Si007446m Si007446m Si037024m Si037024m Si022201m Si022201m rps18 rps18 Si002275m Si002275m Si036836m Si036836m Si018102m Si018102m
"Si022201m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022201mUncharacterized protein (408 aa)    
Predicted Functional Partners:
Si037330m
Uncharacterized protein (231 aa)
     
    0.903
Si007446m
Uncharacterized protein (145 aa)
     
    0.889
Si036836m
Uncharacterized protein (297 aa)
   
  0.889
rps18
Ribosomal protein S18 (163 aa)
   
  0.889
Si026478m
Uncharacterized protein (389 aa)
     
  0.875
Si018102m
Uncharacterized protein (266 aa)
     
  0.875
Si010307m
Uncharacterized protein (389 aa)
     
  0.875
Si002275m
Uncharacterized protein (319 aa)
     
  0.875
Si037024m
Uncharacterized protein (270 aa)
     
  0.870
Si031425m
Uncharacterized protein (145 aa)
     
  0.870
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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