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Si034781m Si034781m Si034881m Si034881m Si006010m Si006010m Si035158m Si035158m Si026908m Si026908m Si013699m Si013699m Si004404m Si004404m Si034692m Si034692m Si010975m Si010975m Si022231m Si022231m Si021463m Si021463m
"Si022231m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022231mUncharacterized protein (401 aa)    
Predicted Functional Partners:
Si035158m
Uncharacterized protein (525 aa)
     
 
  0.982
Si026908m
Uncharacterized protein (183 aa)
   
 
  0.977
Si010975m
Uncharacterized protein (231 aa)
   
 
  0.977
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
 
  0.977
Si013699m
Uncharacterized protein (463 aa)
     
 
  0.975
Si006010m
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (667 aa)
     
 
  0.975
Si004404m
Uncharacterized protein (637 aa)
     
 
  0.975
Si021463m
Uncharacterized protein (629 aa)
     
 
  0.970
Si034881m
Uncharacterized protein (578 aa)
     
 
  0.970
Si034781m
Uncharacterized protein (602 aa)
     
 
  0.970
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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