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Si011009m Si011009m Si030048m Si030048m Si034207m Si034207m Si001403m Si001403m Si000260m Si000260m Si025904m Si025904m Si025839m Si025839m Si013200m Si013200m Si035798m Si035798m Si022238m Si022238m Si017108m Si017108m
"Si022238m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022238mUncharacterized protein (400 aa)    
Predicted Functional Partners:
Si034207m
Uncharacterized protein (867 aa)
     
  0.878
Si025839m
Uncharacterized protein (1147 aa)
     
  0.878
Si000260m
Uncharacterized protein (880 aa)
     
  0.878
Si025904m
Uncharacterized protein (979 aa)
     
  0.858
Si013200m
Uncharacterized protein (961 aa)
     
  0.858
Si035798m
Uncharacterized protein (431 aa)
     
  0.821
Si030048m
Uncharacterized protein (403 aa)
     
  0.821
Si001403m
Uncharacterized protein (453 aa)
     
  0.821
Si017108m
Uncharacterized protein (469 aa)
     
  0.670
Si011009m
Uncharacterized protein (223 aa)
     
  0.670
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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