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Si021600m Si021600m Si000808m Si000808m Si034747m Si034747m Si035345m Si035345m Si029215m Si029215m Si022252m Si022252m Si017002m Si017002m Si000735m Si000735m Si016771m Si016771m Si000774m Si000774m Si012203m Si012203m
"Si022252m" - Malate dehydrogenase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022252mMalate dehydrogenase (397 aa)    
Predicted Functional Partners:
Si000735m
Uncharacterized protein (608 aa)
   
  0.996
Si017002m
Citrate synthase (498 aa)
   
  0.987
Si016771m
Citrate synthase (572 aa)
   
  0.987
Si035345m
Uncharacterized protein (496 aa)
   
  0.987
Si034747m
Malic enzyme (613 aa)
   
  0.977
Si029215m
Malic enzyme (623 aa)
   
  0.977
Si021600m
Malic enzyme (576 aa)
   
  0.977
Si012203m
Malic enzyme (185 aa)
   
  0.977
Si000808m
Malic enzyme (580 aa)
   
  0.977
Si000774m
Malic enzyme (593 aa)
   
  0.977
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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