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Si034681m Si034681m Si019653m Si019653m Si034563m Si034563m Si033972m Si033972m Si033349m Si033349m Si034692m Si034692m Si018320m Si018320m Si021231m Si021231m Si018008m Si018008m Si022352m Si022352m Si028947m Si028947m
"Si022352m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022352mUncharacterized protein (380 aa)    
Predicted Functional Partners:
Si021231m
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (822 aa)
     
      0.982
Si018320m
Uncharacterized protein (216 aa)
     
      0.975
Si019653m
Uncharacterized protein (258 aa)
     
   
  0.972
Si018008m
Uncharacterized protein (285 aa)
     
   
  0.972
Si033349m
Uncharacterized protein (287 aa)
     
 
  0.964
Si034563m
Uncharacterized protein (666 aa)
     
      0.964
Si028947m
Uncharacterized protein (816 aa)
     
      0.963
Si033972m
Uncharacterized protein (1165 aa)
     
      0.963
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
 
  0.963
Si034681m
Uncharacterized protein (629 aa)
     
   
  0.962
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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