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Si006010m Si006010m Si029366m Si029366m Si029128m Si029128m Si013699m Si013699m Si033349m Si033349m Si034692m Si034692m Si022362m Si022362m Si018320m Si018320m Si004404m Si004404m Si013356m Si013356m Si021231m Si021231m
"Si022362m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022362mUncharacterized protein (379 aa)    
Predicted Functional Partners:
Si021231m
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (822 aa)
     
 
  0.998
Si018320m
Uncharacterized protein (216 aa)
     
      0.997
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
 
  0.997
Si029128m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (680 aa)
     
 
  0.997
Si013356m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (681 aa)
     
 
  0.997
Si013699m
Uncharacterized protein (463 aa)
     
 
  0.996
Si006010m
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (667 aa)
     
 
  0.996
Si004404m
Uncharacterized protein (637 aa)
     
 
  0.996
Si033349m
Uncharacterized protein (287 aa)
     
 
  0.996
Si029366m
Uncharacterized protein (568 aa)
   
 
  0.996
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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