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Si039063m Si039063m Si039056m Si039056m Si014869m Si014869m Si029375m Si029375m Si034302m Si034302m Si006997m Si006997m Si009719m Si009719m Si022390m Si022390m Si034292m Si034292m Si016716m Si016716m Si017048m Si017048m
"Si022390m" - Derlin in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022390mDerlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (372 aa)    
Predicted Functional Partners:
Si006997m
Uncharacterized protein (300 aa)
     
  0.969
Si034302m
Uncharacterized protein (805 aa)
     
  0.961
Si034292m
Uncharacterized protein (810 aa)
     
  0.961
Si016716m
Uncharacterized protein (593 aa)
     
  0.953
Si039063m
Uncharacterized protein (778 aa)
     
  0.953
Si039056m
Uncharacterized protein (798 aa)
     
  0.953
Si017048m
Uncharacterized protein (485 aa)
     
  0.953
Si014869m
Uncharacterized protein (788 aa)
     
  0.953
Si009719m
Uncharacterized protein (564 aa)
     
  0.953
Si029375m
Uncharacterized protein (565 aa)
     
  0.935
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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