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Si036070m Si036070m Si035392m Si035392m Si035388m Si035388m Si039249m Si039249m Si022465m Si022465m Si039999m Si039999m Si021663m Si021663m Si040266m Si040266m Si035134m Si035134m Si033345m Si033345m Si000911m Si000911m
"Si022465m" - Reticulon-like protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022465mReticulon-like protein (358 aa)    
Predicted Functional Partners:
Si000911m
Uncharacterized protein (549 aa)
     
      0.708
Si021663m
Uncharacterized protein (549 aa)
       
      0.708
Si040266m
Uncharacterized protein (498 aa)
     
        0.506
Si039999m
Uncharacterized protein (524 aa)
     
        0.506
Si039249m
Uncharacterized protein (523 aa)
     
        0.506
Si036070m
Glutamate decarboxylase (391 aa)
     
        0.506
Si035392m
Uncharacterized protein (489 aa)
     
        0.506
Si035388m
Glutamate decarboxylase (490 aa)
     
        0.506
Si035134m
Uncharacterized protein (529 aa)
     
        0.506
Si033345m
Uncharacterized protein (344 aa)
     
        0.506
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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