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Si030507m Si030507m Si002897m Si002897m Si037323m Si037323m Si021092m Si021092m Si037566m Si037566m Si010935m Si010935m Si022472m Si022472m Si002811m Si002811m Si020956m Si020956m Si031176m Si031176m Si013672m Si013672m
"Si022472m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022472mUncharacterized protein (357 aa)    
Predicted Functional Partners:
Si013672m
Uncharacterized protein (476 aa)
   
        0.562
Si021092m
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (988 aa)
       
      0.559
Si020956m
Uncharacterized protein (1653 aa)
       
      0.559
Si010935m
Uncharacterized protein (243 aa)
   
        0.512
Si031176m
Uncharacterized protein (195 aa)
   
        0.490
Si030507m
Uncharacterized protein (326 aa)
   
        0.486
Si002897m
Uncharacterized protein (212 aa)
   
        0.476
Si037323m
Uncharacterized protein (231 aa)
   
        0.468
Si037566m
Uncharacterized protein (203 aa)
   
          0.463
Si002811m
Photosystem II reaction center Psb28 protein (227 aa)
   
        0.457
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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