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Si009186m Si009186m Si031442m Si031442m Si018767m Si018767m Si022495m Si022495m Si031148m Si031148m Si037339m Si037339m Si007449m Si007449m Si001120m Si001120m Si016141m Si016141m Si015318m Si015318m Si015119m Si015119m
"Si022495m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022495mUncharacterized protein (353 aa)    
Predicted Functional Partners:
Si031148m
Uncharacterized protein (200 aa)
     
  0.992
Si018767m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (110 aa)
     
  0.990
Si007449m
Uncharacterized protein (144 aa)
     
  0.990
Si001120m
Uncharacterized protein (506 aa)
     
  0.989
Si016141m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1154 aa)
       
  0.988
Si009186m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1394 aa)
       
  0.985
Si037339m
Uncharacterized protein (230 aa)
     
  0.984
Si031442m
Uncharacterized protein (143 aa)
     
  0.984
Si015318m
Uncharacterized protein (486 aa)
     
  0.983
Si015119m
Uncharacterized protein (206 aa)
     
  0.983
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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