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Si005661m Si005661m Si036950m Si036950m Si035599m Si035599m Si035475m Si035475m Si034909m Si034909m Si016686m Si016686m Si028853m Si028853m Si022539m Si022539m Si016129m Si016129m Si000606m Si000606m Si020958m Si020958m
"Si022539m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si022539mUncharacterized protein (346 aa)    
Predicted Functional Partners:
Si000606m
Uncharacterized protein (653 aa)
     
  0.766
Si016129m
Uncharacterized protein (1222 aa)
       
  0.693
Si020958m
Uncharacterized protein (1629 aa)
     
  0.684
Si005661m
Uncharacterized protein (2351 aa)
       
  0.657
Si034909m
Uncharacterized protein (572 aa)
     
    0.657
Si028853m
Uncharacterized protein (928 aa)
     
    0.655
Si035475m
Uncharacterized protein (477 aa)
       
    0.655
Si016686m
Uncharacterized protein (606 aa)
       
    0.653
Si036950m
Uncharacterized protein (279 aa)
     
  0.635
Si035599m
Uncharacterized protein (459 aa)
     
  0.635
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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