Full Link:
STRINGSTRING
MCON_1952 MCON_1952 endA endA MCON_0721 MCON_0721 MCON_2842 MCON_2842 MCON_1060 MCON_1060 rpa rpa MCON_1550 MCON_1550 MCON_1545 MCON_1545 top6A top6A MCON_1549 MCON_1549 top6B top6B
"MCON_1550" - Hypothetical protein in Methanosaeta concilii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_1550Hypothetical protein (296 aa)    
Predicted Functional Partners:
rpa
Single-stranded DNA-binding replication protein A (409 aa)
 score_image   score_image       score_image   0.984
MCON_2842
OB-fold nucleic acid binding domain-containing protein (371 aa)
 score_image   score_image       score_image   0.851
MCON_1952
Ser/Thr protein phosphatase family protein (264 aa)
 score_image   score_image       score_image   0.815
top6A
DNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity (375 aa)
 score_image   score_image           0.779
MCON_1545
Hypothetical protein (60 aa)
 score_image   score_image           0.774
top6B
DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity (611 aa)
 score_image   score_image           0.752
MCON_1549
AsnC family transcriptional regulator (76 aa)
 score_image   score_image           0.751
endA
tRNA-splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5’ and 3’ splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’ cyclic phosphate and 5’-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (350 aa)
     score_image       score_image   0.671
MCON_1060
Hypothetical protein (121 aa)
 score_image   score_image           0.660
MCON_0721
Hypothetical protein (149 aa)
 score_image   score_image           0.659
Your Current Organism:
Methanosaeta concilii
NCBI taxonomy Id: 990316
Other names: M. concilii, M. concilii GP6, Methanisaeta concilii, Methanosaeta concilii, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanosaeta concilii str. GP6, Methanosaeta concilii strain GP6, Methanothrix soehngenii
Server load: low (6%)