STRINGSTRING
Dhx35 Dhx35 U2af1 U2af1 Prpf40b Prpf40b Crnkl1 Crnkl1 ENSDORP00000000639 ENSDORP00000000639 Gpatch2l Gpatch2l Prpf18 Prpf18 Snrpa1 Snrpa1 Lsm6 Lsm6 Hnrnpdl Hnrnpdl Mapre3 Mapre3 Pprc1 Pprc1 Syf2 Syf2 Sox30 Sox30 Snrpd2 Snrpd2 Ldlrad1 Ldlrad1 ENSDORP00000002141 ENSDORP00000002141 Sf3b1 Sf3b1 Rbm14 Rbm14 Sf3b2 Sf3b2 L3mbtl1 L3mbtl1 LOC105985762 LOC105985762 U2af2 U2af2 Ddx17 Ddx17 Ralyl Ralyl Slc30a5 Slc30a5 Srsf5 Srsf5 Snrnp40 Snrnp40 Rbm6 Rbm6 Ddx42 Ddx42 Hspa14 Hspa14 Snrpn Snrpn Puf60 Puf60 Ddx5 Ddx5 Ddx39b Ddx39b Btbd16 Btbd16 Ppie Ppie U2surp U2surp Txnl4b Txnl4b Dhx38 Dhx38 Rbm22 Rbm22 Prpf6 Prpf6 Sf3a1 Sf3a1 ENSDORP00000005261 ENSDORP00000005261 Zmat5 Zmat5 Aggf1 Aggf1 Sf3b5 Sf3b5 Snrnp200 Snrnp200 Snrpc Snrpc Prpf8 Prpf8 Slu7 Slu7 LOC105999962 LOC105999962 Snrpa Snrpa Prpf40a Prpf40a Tada1 Tada1 Isy1 Isy1 Lsm3 Lsm3 Prpf19 Prpf19 Rbm17 Rbm17 Ythdc2 Ythdc2 Ddx50 Ddx50 Lsm10 Lsm10 Dhx32 Dhx32 Prpf31 Prpf31 Hnrnpm Hnrnpm Snrpd1 Snrpd1 Magohb Magohb Dhx34 Dhx34 Tia1 Tia1 Srsf7 Srsf7 Prpf3 Prpf3 Hspa13 Hspa13 Cdc5l Cdc5l Uhrf1bp1 Uhrf1bp1 Tra2a Tra2a Pdcl2 Pdcl2 Xab2 Xab2 Sf3b6 Sf3b6 Cwc27 Cwc27 Snrnp27 Snrnp27 Naa38 Naa38 Snrnp70 Snrnp70 Tapt1 Tapt1 Acin1 Acin1 Tial1 Tial1 Zfp318 Zfp318 Hnrnpab Hnrnpab Cwc15 Cwc15 Hnrnpa3 Hnrnpa3 Zfp804a Zfp804a Tdrd12 Tdrd12 Slirp Slirp Snw1 Snw1 Pdcl3 Pdcl3 Spaca6 Spaca6 Ddx23 Ddx23 Eif4a3 Eif4a3 Ddx39a Ddx39a L3mbtl4 L3mbtl4 Srsf9 Srsf9 Btbd9 Btbd9 Rbm25 Rbm25 Raly Raly Tcerg1l Tcerg1l Ncbp1 Ncbp1 Slc30a7 Slc30a7 Dhx15 Dhx15 Wdr25 Wdr25 Thoc3 Thoc3 Sf3b3 Sf3b3 Igf2bp3 Igf2bp3 Fus Fus Bcas2 Bcas2 Sf3a2 Sf3a2 Srsf2 Srsf2 Zmat2 Zmat2 ENSDORP00000014116 ENSDORP00000014116 Srsf1 Srsf1 Ddx51 Ddx51 Aqr Aqr Hspa8 Hspa8 Rbmx Rbmx Hnrnpu Hnrnpu Magoh Magoh Myef2 Myef2 Hnrnpk Hnrnpk Safb2 Safb2 Safb Safb Plrg1 Plrg1 Sf3b4 Sf3b4 Mtmr11 Mtmr11 Hspa1l Hspa1l Ccdc12 Ccdc12 Ybx1 Ybx1 L3mbtl3 L3mbtl3 Pqbp1 Pqbp1 Ubap2l Ubap2l Hnrnpa0 Hnrnpa0 ENSDORP00000016171 ENSDORP00000016171 ENSDORP00000016207 ENSDORP00000016207 ENSDORP00000016208 ENSDORP00000016208 3425401B19Rik 3425401B19Rik Mapre2 Mapre2 Snrpe Snrpe ENSDORP00000016689 ENSDORP00000016689 ENSDORP00000016701 ENSDORP00000016701 Lsm4 Lsm4 Tmem59l Tmem59l ENSDORP00000017391 ENSDORP00000017391 Lyrm7 Lyrm7 ENSDORP00000017605 ENSDORP00000017605 Dhx8 Dhx8 Hspa2 Hspa2 Prpf38b Prpf38b Rbm8a Rbm8a Gpatch8 Gpatch8 Czib Czib BC024978 BC024978 ENSDORP00000018014 ENSDORP00000018014 Zfp804b Zfp804b Ddx59 Ddx59 ENSDORP00000018107 ENSDORP00000018107 Ctnnbl1 Ctnnbl1 Srsf3 Srsf3 ENSDORP00000018504 ENSDORP00000018504 Lsm8 Lsm8 Snu13 Snu13 Ncbp2 Ncbp2 Lsm5 Lsm5 LOC105999785 LOC105999785 LOC105999841 LOC105999841 LOC105999961 LOC105999961 ENSDORP00000019128 ENSDORP00000019128 ENSDORP00000019150 ENSDORP00000019150 Dqx1 Dqx1 ENSDORP00000019253 ENSDORP00000019253 Hspa1b Hspa1b ENSDORP00000019408 ENSDORP00000019408 Btbd19 Btbd19 ENSDORP00000019644 ENSDORP00000019644 LOC106002817 LOC106002817 Alyref Alyref Ddx46 Ddx46 ENSDORP00000020868 ENSDORP00000020868 ENSDORP00000020874 ENSDORP00000020874 Prpf4 Prpf4 ENSDORP00000020910 ENSDORP00000020910 ENSDORP00000020932 ENSDORP00000020932 Poldip3 Poldip3 Srsf4 Srsf4 ENSDORP00000021226 ENSDORP00000021226 Rbm41 Rbm41 Hnrnpc Hnrnpc LOC105986255 LOC105986255 ENSDORP00000021263 ENSDORP00000021263 ENSDORP00000021463 ENSDORP00000021463 LOC106002076 LOC106002076 R3hcc1l R3hcc1l ENSDORP00000021778 ENSDORP00000021778 ENSDORP00000021845 ENSDORP00000021845 Rbm38 Rbm38 LOC105991427 LOC105991427 Snrpb Snrpb ENSDORP00000022466 ENSDORP00000022466 Eftud2 Eftud2 Ddx21 Ddx21 Slc30a6 Slc30a6 U2af1l4 U2af1l4 ENSDORP00000022795 ENSDORP00000022795 Snrpg Snrpg Gmcl1 Gmcl1 Daw1 Daw1 Snrpb2 Snrpb2 Usp39 Usp39 Lsm2 Lsm2 Txnl4a Txnl4a ENSDORP00000023181 ENSDORP00000023181 Ppih Ppih Ifi44 Ifi44 Rnpc3 Rnpc3 ENSDORP00000023286 ENSDORP00000023286 Wbp11 Wbp11 Wdr53 Wdr53 Smndc1 Smndc1 ENSDORP00000023499 ENSDORP00000023499 Sf3a3 Sf3a3 ENSDORP00000023787 ENSDORP00000023787 LOC106001022 LOC106001022 ENSDORP00000024082 ENSDORP00000024082 ENSDORP00000024208 ENSDORP00000024208 Rbmxl2 Rbmxl2 Srsf6 Srsf6 Cdc40 Cdc40 Prpf38a Prpf38a ENSDORP00000024643 ENSDORP00000024643 ENSDORP00000024666 ENSDORP00000024666 LOC106002143 LOC106002143 Srsf10 Srsf10 Hnrnpd Hnrnpd ENSDORP00000024924 ENSDORP00000024924 Pcbp1 Pcbp1 Rbm24 Rbm24 Phf5a Phf5a LOC105998890 LOC105998890 Bud31 Bud31 Wac Wac Mapre1 Mapre1 ENSDORP00000025643 ENSDORP00000025643 Thoc1 Thoc1 Zc3h13 Zc3h13 Hnrnpa1 Hnrnpa1 Tra2b Tra2b ENSDORP00000026285 ENSDORP00000026285 Zc2hc1c Zc2hc1c Cherp Cherp Ubap2 Ubap2 Thoc2 Thoc2 R3hcc1 R3hcc1 ENSDORP00000027062 ENSDORP00000027062 Gpatch2 Gpatch2 Ppil1 Ppil1 ENSDORP00000027310 ENSDORP00000027310 Lsm7 Lsm7 Tmem59 Tmem59 Dhx16 Dhx16 Sart1 Sart1 Hspa12b Hspa12b Rbm5 Rbm5 Tcerg1 Tcerg1 Hspa12a Hspa12a Rbm10 Rbm10 Topors Topors
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dhx35Probable ATP-dependent RNA helicase DHX35. (703 aa)
U2af1Splicing factor U2AF 35 kDa subunit. (232 aa)
Prpf40bpre-mRNA-processing factor 40 homolog B isoform X2. (870 aa)
Crnkl1Crooked neck-like protein 1. (693 aa)
ENSDORP00000000639annotation not available (126 aa)
Gpatch2lLOW QUALITY PROTEIN: G patch domain-containing protein 2-like. (456 aa)
Prpf18pre-mRNA-splicing factor 18. (342 aa)
Snrpa1U2 small nuclear ribonucleoprotein A. (235 aa)
Lsm6U6 snRNA-associated Sm-like protein LSm6. (80 aa)
HnrnpdlHeterogeneous nuclear ribonucleoprotein D-like. (421 aa)
Mapre3Microtubule-associated protein RP/EB family member 3 isoform X1. (281 aa)
Pprc1Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1. (1624 aa)
Syf2pre-mRNA-splicing factor SYF2. (244 aa)
Sox30Transcription factor SOX-30. (430 aa)
Snrpd2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
Ldlrad1Low-density lipoprotein receptor class A domain-containing protein 1. (208 aa)
ENSDORP00000002141annotation not available (127 aa)
Sf3b1Splicing factor 3B subunit 1. (1260 aa)
Rbm14RNA-binding protein 14 isoform X1. (669 aa)
Sf3b2Splicing factor 3B subunit 2. (879 aa)
L3mbtl1Lethal(3)malignant brain tumor-like protein 1. (833 aa)
LOC105985762Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (110 aa)
U2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
Ddx17Probable ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (719 aa)
RalylRNA-binding Raly-like protein. (293 aa)
Slc30a5Zinc transporter 5. (711 aa)
Srsf5Serine/arginine-rich splicing factor 5 isoform X2. (269 aa)
Snrnp40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
Rbm6RNA-binding protein 6 isoform X2. (986 aa)
Ddx42ATP-dependent RNA helicase DDX42. (889 aa)
Hspa14Heat shock 70 kDa protein 14; Belongs to the heat shock protein 70 family. (505 aa)
SnrpnSmall nuclear ribonucleoprotein-associated protein. (240 aa)
Puf60poly(U)-binding-splicing factor PUF60 isoform X1. (557 aa)
Ddx5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
Ddx39bSpliceosome RNA helicase DDX39B. (399 aa)
Btbd16BTB/POZ domain-containing protein 16. (405 aa)
PpiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
U2surpU2 snRNP-associated SURP motif-containing protein. (423 aa)
Txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
Dhx38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1228 aa)
Rbm22pre-mRNA-splicing factor RBM22. (358 aa)
Prpf6pre-mRNA-processing factor 6. (856 aa)
Sf3a1Splicing factor 3A subunit 1. (793 aa)
ENSDORP00000005261annotation not available (68 aa)
Zmat5Zinc finger matrin-type protein 5. (170 aa)
Aggf1Angiogenic factor with G patch and FHA domains 1. (713 aa)
Sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
Snrnp200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2110 aa)
SnrpcU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (230 aa)
Prpf8pre-mRNA-processing-splicing factor 8. (1966 aa)
Slu7pre-mRNA-splicing factor SLU7. (536 aa)
LOC105999962Retinitis pigmentosa 9 protein. (181 aa)
SnrpaU1 small nuclear ribonucleoprotein A. (284 aa)
Prpf40apre-mRNA-processing factor 40 homolog A isoform X2. (950 aa)
Tada1Transcriptional adapter 1. (335 aa)
Isy1pre-mRNA-splicing factor ISY1 homolog. (277 aa)
Lsm3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (114 aa)
Prpf19pre-mRNA-processing factor 19. (504 aa)
Rbm17Splicing factor 45. (118 aa)
Ythdc2Probable ATP-dependent RNA helicase YTHDC2. (1393 aa)
Ddx50ATP-dependent RNA helicase DDX50 isoform X1. (737 aa)
Lsm10U7 snRNA-associated Sm-like protein LSm10. (123 aa)
Dhx32Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. (711 aa)
Prpf31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
HnrnpmHeterogeneous nuclear ribonucleoprotein M isoform X3. (730 aa)
Snrpd1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
MagohbProtein mago nashi homolog 2 isoform X1. (102 aa)
Dhx34LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX34. (1140 aa)
Tia1Nucleolysin TIA-1 isoform p40. (353 aa)
Srsf7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
Prpf3U4/U6 small nuclear ribonucleoprotein Prp3. (634 aa)
Hspa13Heat shock 70 kDa protein 13. (470 aa)
Cdc5lCell division cycle 5-like protein. (802 aa)
Uhrf1bp1UHRF1-binding protein 1. (1434 aa)
Tra2aTransformer-2 protein homolog alpha isoform X1. (280 aa)
Pdcl2Uncharacterized protein LOC105980190. (241 aa)
Xab2pre-mRNA-splicing factor SYF1 isoform X1. (855 aa)
Sf3b6Splicing factor 3B subunit 6. (125 aa)
Cwc27Peptidyl-prolyl cis-trans isomerase CWC27 homolog. (471 aa)
Snrnp27U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (156 aa)
Naa38N(Alpha)-acetyltransferase 38, NatC auxiliary subunit isoform X2. (125 aa)
Snrnp70U1 small nuclear ribonucleoprotein 70 kDa. (442 aa)
Tapt1Transmembrane anterior posterior transformation protein 1 homolog. (501 aa)
Acin1Apoptotic chromatin condensation inducer in the nucleus isoform X1. (578 aa)
Tial1Nucleolysin TIAR isoform X1. (409 aa)
Zfp318Zinc finger protein 318. (2058 aa)
HnrnpabHeterogeneous nuclear ribonucleoprotein A/B isoform X1. (328 aa)
Cwc15Spliceosome-associated protein CWC15 homolog. (227 aa)
Hnrnpa3Heterogeneous nuclear ribonucleoprotein A3 isoform X1. (361 aa)
Zfp804aZinc finger protein 804A. (1198 aa)
Tdrd12Putative ATP-dependent RNA helicase TDRD12. (1187 aa)
SlirpSRA stem-loop-interacting RNA-binding protein, mitochondrial. (111 aa)
Snw1SNW domain-containing protein 1. (539 aa)
Pdcl3Phosducin-like protein 3. (240 aa)
Spaca6Uncharacterized protein LOC105994184. (324 aa)
Ddx23Probable ATP-dependent RNA helicase DDX23. (820 aa)
Eif4a3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (419 aa)
Ddx39aATP-dependent RNA helicase DDX39A. (427 aa)
L3mbtl4Lethal(3)malignant brain tumor-like protein 4. (610 aa)
Srsf9Serine/arginine-rich splicing factor 9. (221 aa)
Btbd9BTB/POZ domain-containing protein 9. (604 aa)
Rbm25RNA-binding protein 25. (823 aa)
RalyRNA-binding protein Raly. (211 aa)
Tcerg1lTranscription elongation regulator 1-like protein. (512 aa)
Ncbp1LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1. (779 aa)
Slc30a7Zinc transporter 7. (376 aa)
Dhx15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (795 aa)
Wdr25WD repeat-containing protein 25. (537 aa)
Thoc3THO complex subunit 3. (294 aa)
Sf3b3Splicing factor 3B subunit 3. (1217 aa)
Igf2bp3Insulin-like growth factor 2 mRNA-binding protein 3 isoform X1. (579 aa)
FusRNA-binding protein FUS isoform X2. (516 aa)
Bcas2pre-mRNA-splicing factor SPF27 isoform X1. (225 aa)
Sf3a2Splicing factor 3A subunit 2. (463 aa)
Srsf2Serine/arginine-rich splicing factor 2. (204 aa)
Zmat2Zinc finger matrin-type protein 2. (171 aa)
ENSDORP00000014116annotation not available (71 aa)
Srsf1Serine/arginine-rich splicing factor 1. (253 aa)
Ddx51ATP-dependent RNA helicase DDX51; Belongs to the DEAD box helicase family. (170 aa)
AqrRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1464 aa)
Hspa8Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family. (646 aa)
RbmxRNA-binding motif protein, X chromosome isoform X1. (391 aa)
HnrnpuLOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U. (787 aa)
MagohProtein mago nashi homolog. (146 aa)
Myef2Myelin expression factor 2. (537 aa)
HnrnpkHeterogeneous nuclear ribonucleoprotein K isoform X2. (466 aa)
Safb2Scaffold attachment factor B2. (885 aa)
SafbScaffold attachment factor B1 isoform X1. (916 aa)
Plrg1Pleiotropic regulator 1. (507 aa)
Sf3b4Splicing factor 3B subunit 4 isoform X2. (424 aa)
Mtmr11Myotubularin-related protein 11. (701 aa)
Hspa1lHeat shock 70 kDa protein 1-like; Belongs to the heat shock protein 70 family. (641 aa)
Ccdc12Coiled-coil domain-containing protein 12. (165 aa)
Ybx1Nuclease-sensitive element-binding protein 1. (214 aa)
L3mbtl3Lethal(3)malignant brain tumor-like protein 3 isoform X1. (786 aa)
Pqbp1Polyglutamine-binding protein 1. (268 aa)
Ubap2lUbiquitin-associated protein 2-like. (129 aa)
Hnrnpa0Heterogeneous nuclear ribonucleoprotein A0. (348 aa)
ENSDORP00000016171annotation not available (154 aa)
ENSDORP00000016207annotation not available (149 aa)
ENSDORP00000016208annotation not available (330 aa)
3425401B19RikUncharacterized protein C10orf71 homolog. (1398 aa)
Mapre2Microtubule-associated protein RP/EB family member 2 isoform X1. (326 aa)
SnrpeSmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ENSDORP00000016689annotation not available (289 aa)
ENSDORP00000016701annotation not available (307 aa)
Lsm4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
Tmem59lTransmembrane protein 59-like. (277 aa)
ENSDORP00000017391annotation not available (282 aa)
Lyrm7Complex III assembly factor LYRM7 isoform X1; Belongs to the complex I LYR family. (104 aa)
ENSDORP00000017605annotation not available (182 aa)
Dhx8ATP-dependent RNA helicase DHX8. (1183 aa)
Hspa2Heat shock-related 70 kDa protein 2; Belongs to the heat shock protein 70 family. (634 aa)
Prpf38bpre-mRNA-splicing factor 38B. (430 aa)
Rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
Gpatch8G patch domain-containing protein 8 isoform X1. (1503 aa)
CzibUPF0587 protein C1orf123 homolog. (160 aa)
BC024978UPF0692 protein C19orf54 homolog. (343 aa)
ENSDORP00000018014annotation not available (122 aa)
Zfp804bZinc finger protein 804B. (1308 aa)
Ddx59Probable ATP-dependent RNA helicase DDX59 isoform X1. (611 aa)
ENSDORP00000018107annotation not available (152 aa)
Ctnnbl1Beta-catenin-like protein 1 isoform X1. (563 aa)
Srsf3Serine/arginine-rich splicing factor 3. (164 aa)
ENSDORP00000018504annotation not available (282 aa)
Lsm8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
Snu13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
Ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
Lsm5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
LOC105999785U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (174 aa)
LOC105999841Heat shock 70 kDa protein 1B; Belongs to the heat shock protein 70 family. (641 aa)
LOC105999961Retinitis pigmentosa 9 protein homolog. (194 aa)
ENSDORP00000019128annotation not available (173 aa)
ENSDORP00000019150annotation not available (335 aa)
Dqx1ATP-dependent RNA helicase DQX1. (720 aa)
ENSDORP00000019253annotation not available (506 aa)
Hspa1bHeat shock protein family A (Hsp70) member 1B. (635 aa)
ENSDORP00000019408annotation not available (108 aa)
Btbd19BTB/POZ domain-containing protein 19. (291 aa)
ENSDORP00000019644annotation not available (160 aa)
LOC106002817Protein BUD31 homolog. (107 aa)
AlyrefTHO complex subunit 4. (245 aa)
Ddx46Probable ATP-dependent RNA helicase DDX46. (983 aa)
ENSDORP00000020868annotation not available (188 aa)
ENSDORP00000020874annotation not available (155 aa)
Prpf4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
ENSDORP00000020910annotation not available (72 aa)
ENSDORP00000020932annotation not available (122 aa)
Poldip3Polymerase delta-interacting protein 3. (421 aa)
Srsf4Serine/arginine-rich splicing factor 4 isoform X1. (495 aa)
ENSDORP00000021226annotation not available (59 aa)
Rbm41RNA-binding protein 41 isoform X1. (434 aa)
HnrnpcHeterogeneous nuclear ribonucleoproteins C1/C2. (288 aa)
LOC105986255Crooked neck-like protein 1. (677 aa)
ENSDORP00000021263annotation not available (92 aa)
ENSDORP00000021463annotation not available (108 aa)
LOC106002076Small nuclear ribonucleoprotein F. (82 aa)
R3hcc1lCoiled-coil domain-containing protein R3HCC1L isoform X1. (195 aa)
ENSDORP00000021778annotation not available (264 aa)
ENSDORP00000021845annotation not available (52 aa)
Rbm38RNA-binding protein 38. (29 aa)
LOC105991427Heterogeneous nuclear ribonucleoprotein A1-like. (46 aa)
SnrpbSmall nuclear ribonucleoprotein-associated protein. (230 aa)
ENSDORP00000022466annotation not available (107 aa)
Eftud2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
Ddx21Nucleolar RNA helicase 2. (777 aa)
Slc30a6Zinc transporter 6. (441 aa)
U2af1l4Splicing factor U2AF 26 kDa subunit isoform X1. (220 aa)
ENSDORP00000022795annotation not available (81 aa)
SnrpgSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
Gmcl1Germ cell-less protein-like 1 isoform X1. (526 aa)
Daw1Dynein assembly factor with WDR repeat domains 1. (415 aa)
Snrpb2U2 small nuclear ribonucleoprotein B'. (225 aa)
Usp39U4/U6.U5 tri-snRNP-associated protein 2. (568 aa)
Lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
Txnl4aThioredoxin-like protein 4A. (71 aa)
ENSDORP00000023181annotation not available (92 aa)
PpihPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
Ifi44Interferon-induced protein 44 isoform X1. (425 aa)
Rnpc3RNA-binding protein 40. (515 aa)
ENSDORP00000023286annotation not available (584 aa)
Wbp11WW domain-binding protein 11. (32 aa)
Wdr53WD repeat-containing protein 53 isoform X2. (360 aa)
Smndc1Survival of motor neuron-related-splicing factor 30. (238 aa)
ENSDORP00000023499annotation not available (74 aa)
Sf3a3Splicing factor 3A subunit 3. (501 aa)
ENSDORP00000023787annotation not available (137 aa)
LOC106001022Crooked neck-like protein 1. (677 aa)
ENSDORP00000024082annotation not available (126 aa)
ENSDORP00000024208annotation not available (52 aa)
Rbmxl2RNA-binding motif protein, X-linked-like-2. (86 aa)
Srsf6Serine/arginine-rich splicing factor 6 isoform X1. (344 aa)
Cdc40pre-mRNA-processing factor 17 isoform X1. (579 aa)
Prpf38apre-mRNA-splicing factor 38A. (270 aa)
ENSDORP00000024643annotation not available (76 aa)
ENSDORP00000024666annotation not available (89 aa)
LOC106002143Small nuclear ribonucleoprotein F-like. (43 aa)
Srsf10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
HnrnpdHeterogeneous nuclear ribonucleoprotein D0. (310 aa)
ENSDORP00000024924annotation not available (177 aa)
Pcbp1poly(RC)-binding protein 1. (356 aa)
Rbm24RNA-binding protein 24. (236 aa)
Phf5aPHD finger-like domain-containing protein 5A. (110 aa)
LOC105998890Transformer-2 protein homolog beta pseudogene. (260 aa)
Bud31Protein BUD31 homolog. (144 aa)
WacWW domain-containing adapter protein with coiled-coil isoform X1. (633 aa)
Mapre1Microtubule-associated protein RP/EB family member 1. (268 aa)
ENSDORP00000025643annotation not available (333 aa)
Thoc1THO complex subunit 1. (644 aa)
Zc3h13Zinc finger CCCH domain-containing protein 13 isoform X2. (1651 aa)
Hnrnpa1Heterogeneous nuclear ribonucleoprotein A1 isoform X2. (372 aa)
Tra2bTransformer-2 protein homolog beta isoform X1. (288 aa)
ENSDORP00000026285annotation not available (59 aa)
Zc2hc1cZinc finger C2HC domain-containing protein 1C. (528 aa)
CherpCalcium homeostasis endoplasmic reticulum protein isoform X1. (903 aa)
Ubap2Ubiquitin-associated protein 2 isoform X2. (1135 aa)
Thoc2THO complex subunit 2. (406 aa)
R3hcc1R3H and coiled-coil domain-containing protein 1. (477 aa)
ENSDORP00000027062annotation not available (333 aa)
Gpatch2G patch domain-containing protein 2 isoform X1. (506 aa)
Ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
ENSDORP00000027310annotation not available (70 aa)
Lsm7U6 snRNA-associated Sm-like protein LSm7. (102 aa)
Tmem59Transmembrane protein 59. (282 aa)
Dhx16Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1044 aa)
Sart1U4/U6.U5 tri-snRNP-associated protein 1. (772 aa)
Hspa12bHeat shock 70 kDa protein 12B. (685 aa)
Rbm5RNA-binding protein 5. (815 aa)
Tcerg1Transcription elongation regulator 1 isoform X2. (1112 aa)
Hspa12aHeat shock 70 kDa protein 12A. (677 aa)
Rbm10RNA-binding protein 10 isoform X4. (930 aa)
ToporsE3 ubiquitin-protein ligase Topors. (984 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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