5 items (Cricetulus griseus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rrm2	Ribonucleoside-diphosphate reductase subunit M2. (390 aa)
	Rrm2b	Ribonucleoside-diphosphate reductase subunit M2 B. (114 aa)
	Nrsn1	Neurensin-1-like protein. (195 aa)
	Rrm1	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (792 aa)
	H671_1g1582	Ribonucleoside-diphosphate reductase subunit M2-like protein. (96 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H671_1g1582	Rrm1	G3I1K7	G3I3B7	Ribonucleoside-diphosphate reductase subunit M2-like protein.	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	0.985
H671_1g1582	Rrm2b	G3I1K7	G3HKZ9	Ribonucleoside-diphosphate reductase subunit M2-like protein.	Ribonucleoside-diphosphate reductase subunit M2 B.	0.681
Nrsn1	Rrm1	G3IAE7	G3I3B7	Neurensin-1-like protein.	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	0.932
Rrm1	H671_1g1582	G3I3B7	G3I1K7	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	Ribonucleoside-diphosphate reductase subunit M2-like protein.	0.985
Rrm1	Nrsn1	G3I3B7	G3IAE7	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	Neurensin-1-like protein.	0.932
Rrm1	Rrm2	G3I3B7	G3I2K8	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	Ribonucleoside-diphosphate reductase subunit M2.	0.999
Rrm1	Rrm2b	G3I3B7	G3HKZ9	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	Ribonucleoside-diphosphate reductase subunit M2 B.	0.999
Rrm2	Rrm1	G3I2K8	G3I3B7	Ribonucleoside-diphosphate reductase subunit M2.	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	0.999
Rrm2	Rrm2b	G3I2K8	G3HKZ9	Ribonucleoside-diphosphate reductase subunit M2.	Ribonucleoside-diphosphate reductase subunit M2 B.	0.966
Rrm2b	H671_1g1582	G3HKZ9	G3I1K7	Ribonucleoside-diphosphate reductase subunit M2 B.	Ribonucleoside-diphosphate reductase subunit M2-like protein.	0.681
Rrm2b	Rrm1	G3HKZ9	G3I3B7	Ribonucleoside-diphosphate reductase subunit M2 B.	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	0.999
Rrm2b	Rrm2	G3HKZ9	G3I2K8	Ribonucleoside-diphosphate reductase subunit M2 B.	Ribonucleoside-diphosphate reductase subunit M2.	0.966