(89 nodes) Syntaxin binding network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_022481	Golgin subfamily A member 2. (165 aa)
	Syt9	Synaptotagmin-9. (222 aa)
	I79_022268	Death-associated protein kinase 1. (184 aa)
	Dapk1	Death-associated protein kinase 1. (667 aa)
	I79_022210	Synaptotagmin-7. (371 aa)
	I79_021837	Leucine-rich repeat serine/threonine-protein kinase 2. (441 aa)
	I79_021836	Leucine-rich repeat serine/threonine-protein kinase 2. (1184 aa)
	I79_021835	Leucine-rich repeat serine/threonine-protein kinase 2. (354 aa)
	Vps18	Vacuolar protein sorting-associated protein 18-like. (973 aa)
	Stx7	Syntaxin-7; Belongs to the syntaxin family. (261 aa)
	Golga2	Golgin subfamily A member 2. (567 aa)
	Sptan1	Spectrin alpha chain, brain. (2253 aa)
	I79_020387	Spectrin alpha chain, brain. (215 aa)
	Rnf40	E3 ubiquitin protein ligase; Belongs to the BRE1 family. (1001 aa)
	Vps11	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (965 aa)
	Scfd2	Sec1 family domain-containing protein 2. (452 aa)
	Vps52	Vacuolar protein sorting-associated protein 52-like. (471 aa)
	Tpcn1	Two pore calcium channel protein 1. (372 aa)
	Syt4	Synaptotagmin-4. (243 aa)
	Syt3	Synaptotagmin-3. (570 aa)
	Syt12	Synaptotagmin-12. (418 aa)
	I79_018099	Beta-soluble NSF attachment protein. (281 aa)
	I79_017379	Gamma-taxilin. (401 aa)
	Napa	Alpha-soluble NSF attachment protein. (103 aa)
	Arpc5l	Golgin subfamily A member 2. (255 aa)
	Syt1	Synaptotagmin-1. (422 aa)
	Stxbp2	Syntaxin-binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (594 aa)
	Vamp7	Vesicle-associated membrane protein 7-like isoform 1; Belongs to the synaptobrevin family. (220 aa)
	Stxbp1	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (385 aa)
	Doc2b	Double C2-like domain-containing protein beta. (413 aa)
	Slc6a4	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (520 aa)
	I79_013077	Synaptotagmin-6. (532 aa)
	Vamp8	Vesicle-associated membrane protein 8. (101 aa)
	Sec22b	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
	Syp	Synaptophysin. (310 aa)
	Tmed4	Transmembrane emp24 domain-containing protein 4. (227 aa)
	I79_010139	Synaptosomal-associated protein 47. (419 aa)
	I79_009907	ATP-binding cassette transporter sub-family C member 9. (1368 aa)
	Snap29	Synaptosomal-associated protein 29. (192 aa)
	Tmed10	Transmembrane emp24 domain-containing protein 10; Belongs to the EMP24/GP25L family. (130 aa)
	Septin5	Septin-5; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (409 aa)
	Cplx1	Complexin-1. (119 aa)
	I79_008636	Vacuolar protein sorting-associated protein 54. (393 aa)
	I79_008360	Voltage-dependent P/Q-type calcium channel subunit alpha-1A. (79 aa)
	I79_008358	Voltage-dependent P/Q-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1A gives rise to P and/or Q- type calcium currents. (1774 aa)
	Baiap3	BAI1-associated protein 3. (1140 aa)
	Sybu	Syntabulin. (523 aa)
	I79_007441	Syntaxin-binding protein 5-like. (435 aa)
	Cav1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (147 aa)
	Cav2	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (162 aa)
	Txlna	Alpha-taxilin. (557 aa)
	Stx6	Syntaxin-6; Belongs to the syntaxin family. (262 aa)
	I79_006234	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (161 aa)
	Snph	Syntaphilin. (491 aa)
	I79_005553	Gamma-soluble NSF attachment protein. (155 aa)
	Scfd1	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. (634 aa)
	Unc13a	Protein unc-13-like A. (1871 aa)
	Stxbp5	Syntaxin-binding protein 5. (1116 aa)
	Syt2	Synaptotagmin-2. (419 aa)
	Cplx2	Complexin-2. (133 aa)
	Tmed9	Transmembrane emp24 domain-containing protein 9. (231 aa)
	I79_003791	HAUS augmin-like complex subunit 2. (203 aa)
	Vamp4	Vesicle-associated membrane protein 4. (141 aa)
	Hectd3	Putative E3 ubiquitin-protein ligase HECTD3. (1200 aa)
	I79_002690	Syntaxin-8. (210 aa)
	I79_002478	BET1-like. (118 aa)
	Rab4a	Ras-related protein Rab-4A. (218 aa)
	Stx16	Syntaxin-16; Belongs to the syntaxin family. (326 aa)
	I79_001967	Beta-taxilin. (667 aa)
	Vamp1	Vesicle-associated membrane protein 1. (95 aa)
	Abca1	ATP-binding cassette sub-family A member 1. (2261 aa)
	I79_000431	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (164 aa)
	Unc13c	Protein unc-13-like C. (1107 aa)
	I79_000139	Protein unc-13-like C. (972 aa)
	I79_000133	Myosin-Va; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1737 aa)
	Snap23	Synaptosomal-associated protein 23. (60 aa)
	Nsf	Vesicle-fusing ATPase. (86 aa)
	I79_026115	Vesicle-fusing ATPase. (50 aa)
	I79_026104	Vesicle-fusing ATPase. (93 aa)
	I79_025997	Vesicle-fusing ATPase. (51 aa)
	CgPICR_000082	Synaptotagmin-10. (184 aa)
	I79_024478	Death-associated protein kinase 1. (157 aa)
	Stxbp3	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
	Cplx3	Complexin-3. (158 aa)
	Syt17	Synaptotagmin-17. (299 aa)
	I79_023366	Synaptotagmin-5. (338 aa)
	I79_023288	Sec1 family domain-containing protein 2; Belongs to the STXBP/unc-18/SEC1 family. (150 aa)
	I79_022915	Synaptotagmin-9. (126 aa)
	I79_022513	UPF0528 protein FAM172A. (162 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abca1	Cav1	G3GTZ6	G3H9I8	ATP-binding cassette sub-family A member 1.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.649
Arpc5l	I79_002478	G3HZI0	G3GXI6	Golgin subfamily A member 2.	BET1-like.	0.575
Arpc5l	I79_005553	G3HZI0	G3H5H2	Golgin subfamily A member 2.	Gamma-soluble NSF attachment protein.	0.479
Arpc5l	I79_018099	G3HZI0	G3I3T1	Golgin subfamily A member 2.	Beta-soluble NSF attachment protein.	0.420
Arpc5l	Napa	G3HZI0	G3I0Z2	Golgin subfamily A member 2.	Alpha-soluble NSF attachment protein.	0.433
Arpc5l	Scfd1	G3HZI0	G3H4J6	Golgin subfamily A member 2.	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.553
Arpc5l	Sec22b	G3HZI0	G3HP80	Golgin subfamily A member 2.	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.	0.546
Arpc5l	Tmed10	G3HZI0	G3HFR3	Golgin subfamily A member 2.	Transmembrane emp24 domain-containing protein 10; Belongs to the EMP24/GP25L family.	0.466
Cav1	Abca1	G3H9I8	G3GTZ6	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	ATP-binding cassette sub-family A member 1.	0.649
Cav1	Cav2	G3H9I8	G3H9I7	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.998
Cav1	I79_000431	G3H9I8	G3GSB2	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.411
Cav1	Snap23	G3H9I8	G3GR92	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Synaptosomal-associated protein 23.	0.673
Cav2	Cav1	G3H9I7	G3H9I8	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.998
Cav2	Snap23	G3H9I7	G3GR92	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Synaptosomal-associated protein 23.	0.506
CgPICR_000082	I79_013077	G3IMK9	G3HQH6	Synaptotagmin-10.	Synaptotagmin-6.	0.478
CgPICR_000082	I79_022915	G3IMK9	G3IGJ8	Synaptotagmin-10.	Synaptotagmin-9.	0.604
CgPICR_000082	Syt3	G3IMK9	G3I4T0	Synaptotagmin-10.	Synaptotagmin-3.	0.471
CgPICR_000082	Vamp1	G3IMK9	G3GUM2	Synaptotagmin-10.	Vesicle-associated membrane protein 1.	0.440
Cplx1	Cplx2	G3HEE3	G3H1A2	Complexin-1.	Complexin-2.	0.918
Cplx1	Cplx3	G3HEE3	G3IIB8	Complexin-1.	Complexin-3.	0.935